neuron_or_neurite.cc

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// -----------------------------------------------------------------------------
//
// Copyright (C) 2021 CERN & University of Surrey for the benefit of the
// BioDynaMo collaboration. All Rights Reserved.
//
// Licensed under the Apache License, Version 2.0 (the "License");
// you may not use this file except in compliance with the License.
//
// See the LICENSE file distributed with this work for details.
// See the NOTICE file distributed with this work for additional information
// regarding copyright ownership.
//
// -----------------------------------------------------------------------------
 
#include "neuroscience/neuron_or_neurite.h"
#include "neuroscience/neurite_element.h"
#include "neuroscience/neuron_soma.h"
 
namespace bdm {
namespace neuroscience {
 
NeuronOrNeurite::~NeuronOrNeurite() = default;
 
AgentPointer<NeuronOrNeurite> NeuronOrNeurite::GetNeuronOrNeuriteAgentPtr()
    const {
  if (auto* neuron = dynamic_cast<const NeuronSoma*>(this)) {
    return neuron->template GetAgentPtr<NeuronOrNeurite>();
  } else if (auto* neurite = dynamic_cast<const NeuriteElement*>(this)) {
    return neurite->template GetAgentPtr<NeuronOrNeurite>();
  }
  assert(false && "This code should not be reached.");
  return AgentPointer<NeuronOrNeurite>();
}
 
StructureIdentifierSWC NeuronOrNeurite::GetIdentifierSWC() const {
  if (IsNeuronSoma()) {
    return StructureIdentifierSWC::kSoma;
  } else {
    return StructureIdentifierSWC::kApicalDendrite;
  }
};
 
bool NeuronOrNeurite::IsNeuronSoma() const {
  return dynamic_cast<const NeuronSoma*>(this) != nullptr;
}
 
bool NeuronOrNeurite::IsNeuriteElement() const {
  return dynamic_cast<const NeuriteElement*>(this) != nullptr;
}
 
}  // namespace neuroscience
}  // namespace bdm